STAR mapping with Snakemake can save you a lot of time. STAR is a fast RNA-Seq aligner, whereas Snakemake provides automatic, reproducible, and scalable pipelining....

R is a great tool to make maps including maps with rivers. I would like to share how I created a map with rivers in R using the simplest code possible....

Combining Python, R, Bash in one Jupyter Notebook makes tracking of the workflow easier, simplifies sharing and makes you more efficient and professional....

An automated genomic variant calling pipeline becomes essential when a project scales to hundreds of genomes. Here is my genomic variant calling pipeline....

I show a simple Hail pipeline to filter a VCF file and build a PCA plot to explore the structure of the data in Databricks Platform....